STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR34196.1Sel1 domain protein repeat-containing protein; COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR001075: IPR006597; KEGG: ant:Arnit_0075 Sel1 domain-containing protein repeat-containing protein; PFAM: Sel1 domain protein repeat-containing protein; nitrogen-fixing NifU domain protein; SMART: Sel1 domain protein repeat-containing protein; SPTR: Sel1 domain protein repeat-containing protein; PFAM: Sel1 repeat; NifU-like domain. (296 aa)    
Predicted Functional Partners:
ADR32879.1
Sel1 domain protein repeat-containing protein; COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597; KEGG: ara:Arad_2749 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Sel1 repeat.
 
     0.778
ADR35198.1
Sel1 domain protein repeat-containing protein; COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597; KEGG: pca:Pcar_1490 TPR repeat-containing protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; SPTR: Conserved tetratricopeptide repeat (TPR) protein; PFAM: Sel1 repeat.
 
     0.778
ADR34195.1
TOBE domain-containing protein; InterPro IPR005116; KEGG: cpb:Cphamn1_0452 TOBE domain protein; PFAM: TOBE domain-containing protein; SPTR: TOBE domain protein; PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain.
       0.768
ADR33009.1
InterPro IPR006597; KEGG: sun:SUN_2411 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Sel1 repeat.
 
     0.748
ilvD
COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR020558: IPR000581: IPR004404; KEGG: tdn:Suden_0065 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 
 0.646
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.627
ADR34182.1
COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR016454: IPR000192: IPR020578; KEGG: wsu:WS2206 cysteine desulfurase; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: PUTATIVE AMINOTRANSFERASE (NIFS HOMOLOG); PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase, NifS family, epsilon proteobacteria type; cysteine desulfurase NifS.
  
 
 0.626
ADR35181.1
Cysteine desulfurase, NifS family; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR020578: IPR000192: IPR016454: IPR017773; KEGG: tdn:Suden_2008 aminotransferase, class V; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: Aminotransferase, class V; TIGRFAM: cysteine desulfurase, NifS family; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase, NifS family, epsilon proteobacteria type; cysteine desulfurase NifS.
  
 
 0.626
ADR32738.1
COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR006058: IPR017900: IPR004489: IPR001041: IPR 017896; KEGG: tdn:Suden_0038 succinate dehydrogenase/fumarate reductase iron-sulfur protein; PFAM: ferredoxin; SPTR: Fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
 
 0.614
ADR34236.1
COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR001041: IPR017896: IPR006058: IPR017900: IPR 004489; KEGG: tdn:Suden_1029 succinate dehydrogenase/fumarate reductase subunit B; PFAM: ferredoxin; PRIAM: Succinate dehydrogenase; SPTR: Succinate dehydrogenase/fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
 
 0.614
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
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