STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR34245.1Beta-lactamase; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: tdn:Suden_0850 beta-lactamase-like; SPTR: Metallo-beta-lactamase family protein; PFAM: Metallo-beta-lactamase superfamily. (197 aa)    
Predicted Functional Partners:
ADR32844.1
Peptidase M15A; COGs: COG3108 conserved hypothetical protein; InterPro IPR013230; KEGG: rpf:Rpic12D_5086 protein of unknown function DUF882; PFAM: Peptidase M15A; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF882).
  
    0.622
ADR34663.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR006311: IPR017909: IPR013027; KEGG: sun:SUN_1332 hypothetical protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Putative uncharacterized protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.614
ADR34243.1
Excinuclease ABC C subunit domain protein; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: sde:Sde_2919 endonuclease; PFAM: Excinuclease ABC C subunit domain protein; SPTR: Excinuclease ABC, C subunit-like protein; PFAM: GIY-YIG catalytic domain.
       0.598
ADR34244.1
InterPro IPR002931; KEGG: abu:Abu_2180 hypothetical protein; PFAM: transglutaminase domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: Transglutaminase-like superfamily.
       0.598
ADR33694.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR017909: IPR013027: IPR015323; KEGG: hth:HTH_0817 sulfide dehydrogenase flavoprotein subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase flavin-binding; SPTR: Sulfide dehydrogenase flavoprotein subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase, flavin-binding; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
   
 0.553
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.535
ADR33396.1
Rhodanese domain protein; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763: IPR004209; KEGG: tdn:Suden_1374 rhodanese-like protein; PFAM: Rhodanese domain protein; ferredoxin thioredoxin reductase beta chain; SMART: Rhodanese domain protein; SPTR: Rhodanese-like domain protein; PFAM: Ferredoxin thioredoxin reductase catalytic beta chain; Rhodanese-like domain.
 
 
 0.501
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.483
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
 
 0.482
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.479
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
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