STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR34343.1KEGG: xal:XALc_2645 hypothetical protein; SPTR: Putative uncharacterized protein. (331 aa)    
Predicted Functional Partners:
ADR34342.1
KEGG: wsu:WS2032 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR34344.1
Hypothetical protein; KEGG: nam:NAMH_1365 long-chain-fatty-acid--CoA ligase; SPTR: 6-phosphogluconate dehydrogenase, decarboxylating.
       0.773
ADR34345.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: afl:Aflv_0778 predicted transcriptional regulator, xre family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Predicted transcriptional regulator, xre family; PFAM: Helix-turn-helix.
       0.533
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.