STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR34670.1Protein of unknown function DUF134; COGs: COG1342 DNA-binding protein; InterPro IPR002852; KEGG: wsu:WS1857 hypothetical protein; PFAM: protein of unknown function DUF134; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF134. (205 aa)    
Predicted Functional Partners:
ADR34669.1
COGs: COG4087 Soluble P-type ATPase; KEGG: pth:PTH_1385 soluble P-type ATPase; SPTR: Soluble P-type ATPase.
 
     0.832
ADR34857.1
Protein of unknown function DUF89; COGs: COG1578 conserved hypothetical protein; InterPro IPR014444: IPR002791; KEGG: tdn:Suden_1861 hypothetical protein; PFAM: protein of unknown function DUF89; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF89.
 
     0.669
ADR33906.1
ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439: IPR003593: IPR017871; KEGG: sun:SUN_0279 multidrug ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Multidrug ABC transporter; PFAM: ABC transporter.
  
    0.506
nifH
Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
  
  
 0.460
ADR33410.1
WD40 repeat, subgroup; InterPro IPR019782: IPR017986: IPR001680: IPR019781; KEGG: wsu:WS1882 hypothetical protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: WD domain, G-beta repeat.
  
     0.416
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
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