STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR34744.1Protein of unknown function DUF400; COGs: COG3018 conserved hypothetical protein; InterPro IPR007293; KEGG: tdn:Suden_0639 hypothetical protein; PFAM: protein of unknown function DUF400; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF400. (149 aa)    
Predicted Functional Partners:
ADR34745.1
KEGG: tdn:Suden_0638 hypothetical protein; SPTR: Putative uncharacterized protein.
     
 0.837
ADR32726.1
COGs: COG1749 Flagellar hook protein FlgE; InterProIPR012835: IPR020013: IPR001444: IPR010810: IPR 011491: IPR010930; KEGG: tdn:Suden_0032 flagellar hook protein FlgE; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; flagellin hook IN repeat protein; protein of unknown function DUF1078 domain protein; SPTR: Flagellar hook FlgE; TIGRFAM: flagellar hook protein FlgE; flagellar hook-basal body protein; PFAM: Flagellin hook IN motif; Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: flagellar [...]
 
  
 0.807
ADR33850.1
COGs: COG1344 Flagellin and related hook-associated protein; KEGG: tdn:Suden_1037 flagellar hook-associated protein FlgL; SPTR: Putative flagellin; PFAM: Bacterial flagellin N-terminal helical region.
  
  
 0.797
ADR34746.1
Putative two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR001789: IPR003593; KEGG: tdn:Suden_0637 response regulator receiver domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase; SPTR: Response regulator receiver domain protein; PFAM: Response regulator receiver domain; Sigma-54 interaction domain.
  
    0.769
ADR33647.1
COGs: COG4786 Flagellar basal body rod protein; InterPro IPR001444: IPR020013: IPR019776; KEGG: tdn:Suden_1104 flagellar basal body rod protein; PFAM: flagellar basal body rod protein; SPTR: Flagellar basal body rod protein; TIGRFAM: flagellar hook-basal body protein; PFAM: Flagella basal body rod protein; TIGRFAM: flagellar hook-basal body proteins.
   
  
 0.692
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.683
ADR33648.1
COGs: COG4786 Flagellar basal body rod protein; InterProIPR001444: IPR010930: IPR020013: IPR012834: IPR 019776; KEGG: tdn:Suden_1103 flagellar basal body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: Flagellar basal-body rod FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; flagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria.
   
  
 0.658
gyrA
DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
       0.651
ADR32831.1
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
  
 0.649
ADR32832.1
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
  
 0.637
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.