STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR34838.1Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: tdn:Suden_0370 peptidase M23B; PFAM: Peptidase M23; SPTR: Peptidase M23B; PFAM: Peptidase family M23. (397 aa)    
Predicted Functional Partners:
ADR34837.1
UDP-sugar diphosphatase; InterPro IPR004385: IPR000086; KEGG: wsu:WS0265 hypothetical protein; PFAM: NUDIX hydrolase; PRIAM: UDP-sugar diphosphatase; SPTR: Putative uncharacterized protein; PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family.
     
 0.824
ADR33122.1
Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: tdn:Suden_0671 peptidase M23B; PFAM: Peptidase M23; SPTR: Peptidase M23B; PFAM: Peptidase family M23.
  
     0.764
ADR34399.1
Peptidase M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: tdn:Suden_0788 peptidase M23B; PFAM: Peptidase M23; SPTR: Peptidase M23B; PFAM: Peptidase family M23.
 
   
 0.748
ADR34882.1
Penicillin-binding protein, 1A family; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR011816: IPR001264: IPR001460; KEGG: tdn:Suden_1892 penicillin-binding protein 1A; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; SPTR: Penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family.
  
   
 0.738
ADR33147.1
COGs: COG1886 Flagellar motor switch/type III secretory pathway protein; InterPro IPR012826: IPR001543: IPR001172; KEGG: tdn:Suden_0708 flagellar motor switch protein FliY; PFAM: surface presentation of antigens (SPOA) protein; SPTR: Flagellar motor switch FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN.
   
   0.737
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
   
 0.673
ADR34839.1
KEGG: tdn:Suden_0371 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.630
ADR34840.1
FAD linked oxidase domain protein; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR016166: IPR006094: IPR004113; KEGG: tdn:Suden_0372 FAD linked oxidase-like; PFAM: FAD linked oxidase domain protein; SPTR: FAD linked oxidase-like protein; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD.
       0.630
ADR34222.1
COGs: COG0681 Signal peptidase I; InterPro IPR019759: IPR019758: IPR000223; KEGG: tdn:Suden_1114 peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Peptidase S26A, signal peptidase I; TIGRFAM: signal peptidase I; manually curated; PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.
 
  
 0.594
ADR34841.1
tRNA-processing RNAse BN; COGs: COG1295 membrane protein; InterPro IPR017039: IPR004664; KEGG: tdn:Suden_0373 ribonuclease BN; PFAM: ribonuclease BN; SPTR: tRNA-processing RNAse BN; TIGRFAM: ribonuclease BN; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN).
       0.583
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
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