STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR35093.1Auxin Efflux Carrier; COGs: COG0679 permease; InterPro IPR004776; KEGG: dak:DaAHT2_2426 auxin efflux carrier; PFAM: Auxin Efflux Carrier; SPTR: Auxin Efflux Carrier; PFAM: Membrane transport protein. (295 aa)    
Predicted Functional Partners:
ADR35092.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: vvu:VV2_0872 ABC-type sugar transport system, periplasmic component; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: ABC-type sugar transport system, periplasmic component; PFAM: family.
       0.587
cowN
Hypothetical protein; Is required to sustain N(2)-dependent growth in the presence of low levels of carbon monoxide (CO). Probably acts by protecting the N(2) fixation ability of the nitrogenase complex, which is inactivated in the presence of CO.
       0.584
ADR35091.1
Diguanylate cyclase/phosphodiesterase with extracellular sensor; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR003660: IPR000160: IPR001633; KEGG: sun:SUN_1481 hypothetical protein; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: Ggdef domain protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
  
    0.570
ADR35095.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: ant:Arnit_2398 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family.
  
    0.447
ADR35096.1
Hypothetical protein; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: sun:SUN_1075 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.409
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
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