STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR35112.1KEGG: lbc:LACBIDRAFT_243251 hypothetical protein; SPTR: Predicted protein. (109 aa)    
Predicted Functional Partners:
ADR35113.1
KEGG: abu:Abu_1615 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.543
ADR35114.1
CMP/dCMP deaminase zinc-binding protein; COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR016192: IPR002125; KEGG: tdn:Suden_1831 guanine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: Guanine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region.
       0.543
ADR35115.1
COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004090: IPR008611: IPR003660: IPR004089; KEGG: sdl:Sdel_0631 chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: Chemotaxis sensory transducer; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
       0.420
Your Current Organism:
Sulfuricurvum kujiense
NCBI taxonomy Id: 709032
Other names: S. kujiense DSM 16994, Sulfuricurvum kujiense DSM 16994, Sulfuricurvum kujiense YK-1, Sulfuricurvum kujiense str. DSM 16994, Sulfuricurvum kujiense strain DSM 16994
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