H9IV23_BOMMO protein (Bombyx mori) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

H9IV23_BOMMO

Uncharacterized protein. (159 aa)

Predicted Functional Partners:

H9J6M0_BOMMO

0.963

H9J5P9_BOMMO

0.962

H9JD53_BOMMO

0.952

H9JVY0_BOMMO

0.951

H9JEE5_BOMMO

0.947

H9IVH2_BOMMO

0.940

H9JWK9_BOMMO

0.939

H9JBM4_BOMMO

0.938

H9JLB5_BOMMO

0.936

H9JRP0_BOMMO

0.934

Your Current Organism:

Bombyx mori

NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H9IV23_BOMMO	H9IVH2_BOMMO	H9IV23	H9IVH2	Uncharacterized protein.	Uncharacterized protein.	0.940
H9IV23_BOMMO	H9J5P9_BOMMO	H9IV23	H9J5P9	Uncharacterized protein.	Uncharacterized protein.	0.962
H9IV23_BOMMO	H9J6M0_BOMMO	H9IV23	H9J6M0	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.963
H9IV23_BOMMO	H9JBM4_BOMMO	H9IV23	H9JBM4	Uncharacterized protein.	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	0.938
H9IV23_BOMMO	H9JD53_BOMMO	H9IV23	H9JD53	Uncharacterized protein.	Uncharacterized protein.	0.952
H9IV23_BOMMO	H9JEE5_BOMMO	H9IV23	H9JEE5	Uncharacterized protein.	Ribosomal_L30 domain-containing protein.	0.947
H9IV23_BOMMO	H9JLB5_BOMMO	H9IV23	H9JLB5	Uncharacterized protein.	Uncharacterized protein.	0.936
H9IV23_BOMMO	H9JRP0_BOMMO	H9IV23	H9JRP0	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.934
H9IV23_BOMMO	H9JVY0_BOMMO	H9IV23	H9JVY0	Uncharacterized protein.	RF_PROK_I domain-containing protein.	0.951
H9IV23_BOMMO	H9JWK9_BOMMO	H9IV23	H9JWK9	Uncharacterized protein.	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.	0.939
H9IVH2_BOMMO	H9IV23_BOMMO	H9IVH2	H9IV23	Uncharacterized protein.	Uncharacterized protein.	0.940
H9IVH2_BOMMO	H9J5P9_BOMMO	H9IVH2	H9J5P9	Uncharacterized protein.	Uncharacterized protein.	0.937
H9IVH2_BOMMO	H9J6M0_BOMMO	H9IVH2	H9J6M0	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.905
H9IVH2_BOMMO	H9JBM4_BOMMO	H9IVH2	H9JBM4	Uncharacterized protein.	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	0.943
H9IVH2_BOMMO	H9JD53_BOMMO	H9IVH2	H9JD53	Uncharacterized protein.	Uncharacterized protein.	0.937
H9IVH2_BOMMO	H9JEE5_BOMMO	H9IVH2	H9JEE5	Uncharacterized protein.	Ribosomal_L30 domain-containing protein.	0.928
H9IVH2_BOMMO	H9JLB5_BOMMO	H9IVH2	H9JLB5	Uncharacterized protein.	Uncharacterized protein.	0.959
H9IVH2_BOMMO	H9JRP0_BOMMO	H9IVH2	H9JRP0	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.902
H9IVH2_BOMMO	H9JVY0_BOMMO	H9IVH2	H9JVY0	Uncharacterized protein.	RF_PROK_I domain-containing protein.	0.929
H9IVH2_BOMMO	H9JWK9_BOMMO	H9IVH2	H9JWK9	Uncharacterized protein.	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.	0.928