STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9IW19_BOMMOGRAM domain-containing protein. (374 aa)    
Predicted Functional Partners:
H9JE65_BOMMO
Uncharacterized protein.
   
  
 0.527
H9IVY0_BOMMO
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
    0.481
H9JD35_BOMMO
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
    0.481
Caudal
Homeobox domain-containing protein.
      
 0.465
H9JL67_BOMMO
Uncharacterized protein.
    
 
 0.445
H9JEE4_BOMMO
Uncharacterized protein.
      
 0.434
H9JJN4_BOMMO
N2227 domain-containing protein.
      
 0.434
H9J6S1_BOMMO
RRM domain-containing protein.
      
 0.422
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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