Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H9IT12_BOMMO | H9IYM1_BOMMO | H9IT12 | H9IYM1 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 5,10-methylenetetrahydrofolate dehydrogenase. | 0.962 |
H9IT12_BOMMO | H9IYX7_BOMMO | H9IT12 | H9IYX7 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | MGS domain-containing protein. | 0.830 |
H9IT12_BOMMO | H9J609_BOMMO | H9IT12 | H9J609 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Uncharacterized protein. | 0.925 |
H9IT12_BOMMO | H9JC74_BOMMO | H9IT12 | H9JC74 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.648 |
H9IT12_BOMMO | H9JL35_BOMMO | H9IT12 | H9JL35 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Aminomethyltransferase. | 0.999 |
H9IT12_BOMMO | H9JX53_BOMMO | H9IT12 | H9JX53 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | ATP-grasp domain-containing protein. | 0.959 |
H9IT12_BOMMO | H9JX54_BOMMO | H9IT12 | H9JX54 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | GARS_C domain-containing protein. | 0.959 |
H9IT12_BOMMO | Q2F5L3_BOMMO | H9IT12 | Q2F5L3 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.998 |
H9IT12_BOMMO | Tyms | H9IT12 | H9IV57 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Thymidylate synthase. | 0.900 |
H9IXT8_BOMMO | H9IYM1_BOMMO | H9IXT8 | H9IYM1 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 5,10-methylenetetrahydrofolate dehydrogenase. | 0.982 |
H9IXT8_BOMMO | H9J609_BOMMO | H9IXT8 | H9J609 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Uncharacterized protein. | 0.983 |
H9IXT8_BOMMO | H9JX53_BOMMO | H9IXT8 | H9JX53 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | ATP-grasp domain-containing protein. | 0.485 |
H9IXT8_BOMMO | H9JX54_BOMMO | H9IXT8 | H9JX54 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | GARS_C domain-containing protein. | 0.946 |
H9IXT8_BOMMO | Q2F5L3_BOMMO | H9IXT8 | Q2F5L3 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.735 |
H9IYM1_BOMMO | H9IT12_BOMMO | H9IYM1 | H9IT12 | 5,10-methylenetetrahydrofolate dehydrogenase. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.962 |
H9IYM1_BOMMO | H9IXT8_BOMMO | H9IYM1 | H9IXT8 | 5,10-methylenetetrahydrofolate dehydrogenase. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.982 |
H9IYM1_BOMMO | H9IYX7_BOMMO | H9IYM1 | H9IYX7 | 5,10-methylenetetrahydrofolate dehydrogenase. | MGS domain-containing protein. | 0.991 |
H9IYM1_BOMMO | H9J609_BOMMO | H9IYM1 | H9J609 | 5,10-methylenetetrahydrofolate dehydrogenase. | Uncharacterized protein. | 0.992 |
H9IYM1_BOMMO | H9JC74_BOMMO | H9IYM1 | H9JC74 | 5,10-methylenetetrahydrofolate dehydrogenase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.973 |
H9IYM1_BOMMO | H9JL35_BOMMO | H9IYM1 | H9JL35 | 5,10-methylenetetrahydrofolate dehydrogenase. | Aminomethyltransferase. | 0.998 |
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