STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9IZ55_BOMMOProtoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (305 aa)    
Predicted Functional Partners:
H9IWL6_BOMMO
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
 
 0.997
H9IUK7_BOMMO
Uroporphyrinogen_deCOase domain-containing protein.
  
 
 0.984
H9IWW4_BOMMO
Uncharacterized protein.
  
 
 0.972
H9JP14_BOMMO
Uncharacterized protein.
  
 
 0.914
H9JDG1_BOMMO
Uncharacterized protein.
  
 
 0.817
H9JEK2_BOMMO
Delta-aminolevulinic acid dehydratase.
  
  
 0.742
H9IS92_BOMMO
Uncharacterized protein.
  
  
 0.740
H9IVV2_BOMMO
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
  0.737
H9IX82_BOMMO
NAD(P)-bd_dom domain-containing protein.
    
  0.737
H9ISH0_BOMMO
HEM4 domain-containing protein.
  
  
 0.724
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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