STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9J1S8_BOMMOUncharacterized protein. (464 aa)    
Predicted Functional Partners:
H9J3Q3_BOMMO
Uncharacterized protein.
  
 0.996
H9IXE2_BOMMO
Uncharacterized protein.
   
 0.993
H9IYA3_BOMMO
HDAg domain-containing protein.
    
 0.990
H9J120_BOMMO
Uncharacterized protein.
    
 0.989
H9J2M2_BOMMO
Transcription elongation factor SPT5.
    
 0.947
H9JX65_BOMMO
Uncharacterized protein.
    
 0.939
H9JL33_BOMMO
Uncharacterized protein.
   
  0.910
H9J7C1_BOMMO
Spt4 domain-containing protein.
    
 0.909
Q1HQ43_BOMMO
DNA-directed RNA polymerase II polypeptide.
    
 0.906
H9J0I1_BOMMO
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.903
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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