STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9J3D2_BOMMOKu domain-containing protein. (469 aa)    
Predicted Functional Partners:
H9J220_BOMMO
DNA_LIGASE_A3 domain-containing protein.
   
 0.988
H9JJ87_BOMMO
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.988
Mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.987
H9IX09_BOMMO
Uncharacterized protein.
   
 0.961
H9J7F7_BOMMO
Zinc-hook domain-containing protein.
   
 0.961
H9IVV9_BOMMO
Uncharacterized protein.
    
 0.959
H9J558_BOMMO
Uncharacterized protein.
    
 
 0.947
H9J3V9_BOMMO
Uncharacterized protein.
    
 
 0.915
H9J9P4_BOMMO
DNA ligase.
   
 0.914
H9JS94_BOMMO
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 
 0.912
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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