STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VlgUncharacterized protein; Belongs to the DEAD box helicase family. (617 aa)    
Predicted Functional Partners:
H9JH99_BOMMO
Uncharacterized protein.
   
 
 0.919
H9JHB4_BOMMO
Uncharacterized protein.
   
 0.898
H9JEK7_BOMMO
Tr-type G domain-containing protein.
   
 0.893
H9IYZ6_BOMMO
Uncharacterized protein.
    
 0.869
Q2F5T3_BOMMO
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.787
Q1HQ34_BOMMO
H+ transporting ATP synthase delta subunit.
   
   0.749
H9JMC0_BOMMO
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
0.710
A1YVX2_BOMMO
Eukaryotic initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.
    
 0.704
H9JT12_BOMMO
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.704
H9J302_BOMMO
Uncharacterized protein.
   
 
 0.688
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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