STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9J804_BOMMOUncharacterized protein. (848 aa)    
Predicted Functional Partners:
Endog
Endonuclease.
   
   0.924
H9IUF0_BOMMO
Helicase C-terminal domain-containing protein.
   
  
 0.842
H9IUA9_BOMMO
Uncharacterized protein.
   
    0.832
H9J4R4_BOMMO
RNase_PH domain-containing protein.
  
 
 0.717
H9JWI2_BOMMO
RNase_PH domain-containing protein.
  
 
 0.717
H9JPM5_BOMMO
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
     
 0.698
H9IVB5_BOMMO
Uncharacterized protein.
  
  
 0.693
H9JL06_BOMMO
Uncharacterized protein.
  
  
 0.692
H9J4G8_BOMMO
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
  
 0.679
H9JQG9_BOMMO
tRNA_int_endo domain-containing protein.
  
  
 0.677
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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