STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9JBB8_BOMMONucleoporin_N domain-containing protein. (941 aa)    
Predicted Functional Partners:
H9JDM5_BOMMO
Uncharacterized protein.
   
 0.992
H9J0T9_BOMMO
Nuclear pore protein.
   
 0.978
H9IX35_BOMMO
Peptidase S59 domain-containing protein.
   
 0.974
H9JN55_BOMMO
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.974
H9JW77_BOMMO
Nsp1_C domain-containing protein.
   
 0.973
H9J3W3_BOMMO
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
   
 0.971
H9J860_BOMMO
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.971
H9J5Q7_BOMMO
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.968
H9JQ69_BOMMO
Uncharacterized protein.
   
 0.965
H9IZK9_BOMMO
Uncharacterized protein.
   
 0.959
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.