STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9JCU4_BOMMOUncharacterized protein. (697 aa)    
Predicted Functional Partners:
UBI1
Ubiquitin/ribosomal protein L40 fusion protein.
    
 
 0.936
H9IVY4_BOMMO
Uncharacterized protein.
    
 
 0.907
H9IWB8_BOMMO
Uncharacterized protein.
    
 
 0.907
H9JP19_BOMMO
Ubiquitin-like domain-containing protein.
    
 
 0.821
H9JBT4_BOMMO
MPN domain-containing protein.
      
 0.666
H9J201_BOMMO
Uncharacterized protein.
    
 
 0.641
RpS30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 
 0.632
H9JD09_BOMMO
Ubiquitin-like domain-containing protein.
    
 
 0.612
H9JD10_BOMMO
AN1-type domain-containing protein.
    
 
 0.612
H9JT09_BOMMO
Ubiquitin-like domain-containing protein.
    
 
 0.611
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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