STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9JDH0_BOMMOUncharacterized protein. (1081 aa)    
Predicted Functional Partners:
H9JKF4_BOMMO
PHD-type domain-containing protein.
     
 0.969
H9IX87_BOMMO
RRM domain-containing protein.
   
 0.658
H9JKX1_BOMMO
TFIID_20kDa domain-containing protein.
   
  0.657
H9J304_BOMMO
TAFH domain-containing protein.
   
  0.656
H9JC07_BOMMO
Uncharacterized protein.
     
 0.652
H9JF42_BOMMO
RRM domain-containing protein.
   
 0.652
RpL32
Ribosomal protein L32.
      
 0.648
H9J0I1_BOMMO
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.645
Taf13
Uncharacterized protein.
   
 0.640
H9IXB5_BOMMO
Uncharacterized protein.
    
 0.628
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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