STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeiCyclic nucleotide-binding domain-containing protein. (898 aa)    
Predicted Functional Partners:
H9JGB2_BOMMO
Uncharacterized protein.
 
 
 
 0.908
H9JAN4_BOMMO
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
 
      0.575
Sps1
Uncharacterized protein.
      
 0.559
H9ITV6_BOMMO
Uncharacterized protein.
    
 0.524
H9JNT9_BOMMO
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
 
      0.505
H9JCT5_BOMMO
AAA domain-containing protein; Belongs to the AAA ATPase family.
      
 0.499
H9J2J4_BOMMO
Uncharacterized protein; Belongs to the potassium channel family.
     
 0.411
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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