STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9JEK4_BOMMOMur_ligase_M domain-containing protein. (438 aa)    
Predicted Functional Partners:
BmDFR
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
     
 0.988
Tyms
Thymidylate synthase.
     
 0.977
H9J609_BOMMO
Uncharacterized protein.
  
 
 0.915
Q2F5L3_BOMMO
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.915
H9JQA6_BOMMO
Folate gamma-glutamyl hydrolase.
     
 0.914
H9IYM1_BOMMO
5,10-methylenetetrahydrofolate dehydrogenase.
    
 0.908
H9IVF7_BOMMO
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
    
 0.902
H9IVF5_BOMMO
GTP_cyclohydroI domain-containing protein.
  
  
 0.840
H9IYL2_BOMMO
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.829
H9JRZ9_BOMMO
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.829
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.