STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9JEM7_BOMMOUncharacterized protein. (76 aa)    
Predicted Functional Partners:
Q1HPU6_BOMMO
Sec61p gamma subunit; Transport protein SEC61; Transport protein Sec61 gamma subunit.
   
 
 0.707
RpL32
Ribosomal protein L32.
  
    0.531
RpL7
Ribosomal protein L7.
  
    0.531
S15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
    0.531
RpL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
    0.514
H9JEN8_BOMMO
PIK helical domain-containing protein.
   
 0.507
H9JEN9_BOMMO
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 0.507
RpL23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
  
 0.506
RpS3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
  
 0.505
H9J7D1_BOMMO
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
  
  
 0.501
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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