H9JKG2_BOMMO protein (Bombyx mori) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

H9JKG2_BOMMO

PAS domain-containing protein. (498 aa)

Predicted Functional Partners:

H9J1T5_BOMMO

0.992

H9J6Z3_BOMMO

0.983

Hsp83

0.982

H9IVG1_BOMMO

0.859

H9JIZ2_BOMMO

0.859

H9ITB8_BOMMO

0.847

BmMET2

0.847

Cycb

0.847

MET1

0.847

H9JDZ2_BOMMO

0.780

Your Current Organism:

Bombyx mori

NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BmMET2	Cycb	H9ITS7	H9J2Y3	Uncharacterized protein.	Uncharacterized protein.	0.909
BmMET2	H9JKG2_BOMMO	H9ITS7	H9JKG2	Uncharacterized protein.	PAS domain-containing protein.	0.847
Cycb	BmMET2	H9J2Y3	H9ITS7	Uncharacterized protein.	Uncharacterized protein.	0.909
Cycb	H9ITB8_BOMMO	H9J2Y3	H9ITB8	Uncharacterized protein.	Uncharacterized protein.	0.961
Cycb	H9JKG2_BOMMO	H9J2Y3	H9JKG2	Uncharacterized protein.	PAS domain-containing protein.	0.847
Cycb	MET1	H9J2Y3	H9J7C4	Uncharacterized protein.	Uncharacterized protein.	0.909
H9ITB8_BOMMO	Cycb	H9ITB8	H9J2Y3	Uncharacterized protein.	Uncharacterized protein.	0.961
H9ITB8_BOMMO	H9JKG2_BOMMO	H9ITB8	H9JKG2	Uncharacterized protein.	PAS domain-containing protein.	0.847
H9IVG1_BOMMO	H9J6Z3_BOMMO	H9IVG1	H9J6Z3	Uncharacterized protein.	PPIase FKBP-type domain-containing protein.	0.842
H9IVG1_BOMMO	H9JDZ2_BOMMO	H9IVG1	H9JDZ2	Uncharacterized protein.	CS domain-containing protein.	0.882
H9IVG1_BOMMO	H9JKG2_BOMMO	H9IVG1	H9JKG2	Uncharacterized protein.	PAS domain-containing protein.	0.859
H9J1T5_BOMMO	H9JKG2_BOMMO	H9J1T5	H9JKG2	Uncharacterized protein.	PAS domain-containing protein.	0.992
H9J1T5_BOMMO	Hsp83	H9J1T5	Q9BLC5	Uncharacterized protein.	Heat shock protein 83; Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co- chaperones that modulate its substrate recognition, ATPase cycle and chaperone function (By similarity). Required for piRNA biogenesis by facilitating loading of [...]	0.481
H9J6Z3_BOMMO	H9IVG1_BOMMO	H9J6Z3	H9IVG1	PPIase FKBP-type domain-containing protein.	Uncharacterized protein.	0.842
H9J6Z3_BOMMO	H9JDZ2_BOMMO	H9J6Z3	H9JDZ2	PPIase FKBP-type domain-containing protein.	CS domain-containing protein.	0.830
H9J6Z3_BOMMO	H9JIZ2_BOMMO	H9J6Z3	H9JIZ2	PPIase FKBP-type domain-containing protein.	Uncharacterized protein.	0.842
H9J6Z3_BOMMO	H9JKG2_BOMMO	H9J6Z3	H9JKG2	PPIase FKBP-type domain-containing protein.	PAS domain-containing protein.	0.983
H9J6Z3_BOMMO	Hsp83	H9J6Z3	Q9BLC5	PPIase FKBP-type domain-containing protein.	Heat shock protein 83; Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co- chaperones that modulate its substrate recognition, ATPase cycle and chaperone function (By similarity). Required for piRNA biogenesis by facilitating loading of [...]	0.980
H9JDZ2_BOMMO	H9IVG1_BOMMO	H9JDZ2	H9IVG1	CS domain-containing protein.	Uncharacterized protein.	0.882
H9JDZ2_BOMMO	H9J6Z3_BOMMO	H9JDZ2	H9J6Z3	CS domain-containing protein.	PPIase FKBP-type domain-containing protein.	0.830