STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apaf-1Uncharacterized protein. (1806 aa)    
Predicted Functional Partners:
H9JT72_BOMMO
HORMA domain-containing protein.
   
 0.945
H9JSM0_BOMMO
Uncharacterized protein.
   
 0.935
PLK1
Uncharacterized protein.
   
 0.922
Cytc
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
     
 0.918
H9JQM1_BOMMO
Uncharacterized protein.
   
 0.906
H9J2P0_BOMMO
Uncharacterized protein; Belongs to the cyclin family.
   
 0.903
P92162_BOMMO
Cyclin B homolog; Belongs to the cyclin family.
   
 0.903
H9JVP6_BOMMO
Uncharacterized protein.
   
 0.901
H9J0T7_BOMMO
TPR_REGION domain-containing protein.
   
 0.899
H9JHX0_BOMMO
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.897
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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