STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BmDFRDihydrofolate reductase; Belongs to the dihydrofolate reductase family. (185 aa)    
Predicted Functional Partners:
Tyms
Thymidylate synthase.
 
 0.999
Q2F5L3_BOMMO
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.990
H9JEK4_BOMMO
Mur_ligase_M domain-containing protein.
     
 0.988
H9JL35_BOMMO
Aminomethyltransferase.
  
 
 0.980
H9J609_BOMMO
Uncharacterized protein.
  
 
 0.979
H9JX54_BOMMO
GARS_C domain-containing protein.
  
 
 0.972
H9IYX7_BOMMO
MGS domain-containing protein.
    
 0.966
H9J3A0_BOMMO
Uncharacterized protein.
   
 
 0.954
H9JXD6_BOMMO
Carrier domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.941
Spr
Sepiapterin reductase.
   
 
 0.939
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.