STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9JUZ3_BOMMODUF3399 domain-containing protein. (246 aa)    
Predicted Functional Partners:
RpS30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.980
H9JUZ2_BOMMO
BTB domain-containing protein; Belongs to the potassium channel family.
 
      0.900
RpL31
Uncharacterized protein.
   
 0.856
RpL23A
Uncharacterized protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.847
RpL30
Ribosomal protein L30.
   
 0.845
RpL35
Uncharacterized protein.
  
 0.835
RpL34
Uncharacterized protein.
  
 0.833
RpL24
Uncharacterized protein.
   
 0.831
RpL32
Ribosomal protein L32.
  
 0.826
RpL35A
Uncharacterized protein.
   
 0.822
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.