Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H9J789_BOMMO | H9JCE7_BOMMO | H9J789 | H9JCE7 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | 0.939 |
H9J789_BOMMO | H9JDY7_BOMMO | H9J789 | H9JDY7 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Uncharacterized protein. | 0.999 |
H9J789_BOMMO | H9JRA9_BOMMO | H9J789 | H9JRA9 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. | 0.674 |
H9J789_BOMMO | H9JS87_BOMMO | H9J789 | H9JS87 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | RIO domain-containing protein. | 0.994 |
H9J789_BOMMO | H9JT28_BOMMO | H9J789 | H9JT28 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Bms1-type G domain-containing protein. | 0.739 |
H9J789_BOMMO | H9JX75_BOMMO | H9J789 | H9JX75 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Uncharacterized protein. | 0.993 |
H9J789_BOMMO | RpS12 | H9J789 | Q5UAN1 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. | 0.935 |
H9J789_BOMMO | RpS2 | H9J789 | Q5UAP3 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | 0.845 |
H9J789_BOMMO | RpS3 | H9J789 | Q5UAP2 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | 0.934 |
H9JCE7_BOMMO | H9J789_BOMMO | H9JCE7 | H9J789 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.939 |
H9JCE7_BOMMO | H9JDY7_BOMMO | H9JCE7 | H9JDY7 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | Uncharacterized protein. | 0.999 |
H9JCE7_BOMMO | H9JRA9_BOMMO | H9JCE7 | H9JRA9 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. | 0.993 |
H9JCE7_BOMMO | H9JS87_BOMMO | H9JCE7 | H9JS87 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | RIO domain-containing protein. | 0.999 |
H9JCE7_BOMMO | H9JT28_BOMMO | H9JCE7 | H9JT28 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | Bms1-type G domain-containing protein. | 0.999 |
H9JCE7_BOMMO | H9JX75_BOMMO | H9JCE7 | H9JX75 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | Uncharacterized protein. | 0.999 |
H9JCE7_BOMMO | RpS12 | H9JCE7 | Q5UAN1 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | 40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. | 0.942 |
H9JCE7_BOMMO | RpS2 | H9JCE7 | Q5UAP3 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | 0.981 |
H9JCE7_BOMMO | RpS20 | H9JCE7 | Q5UAM2 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | Ribosomal protein S20. | 0.957 |
H9JCE7_BOMMO | RpS3 | H9JCE7 | Q5UAP2 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | 0.961 |
H9JDY7_BOMMO | H9J789_BOMMO | H9JDY7 | H9J789 | Uncharacterized protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
page 1 of 6