STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sec61alphaTransport protein Sec61 alpha subunit. (476 aa)    
Predicted Functional Partners:
RpS18
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.999
RpL35
Uncharacterized protein.
  
 
 0.999
RpL23A
Uncharacterized protein; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.999
RpL11
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.999
H9JW78_BOMMO
Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.999
Q1HPU6_BOMMO
Sec61p gamma subunit; Transport protein SEC61; Transport protein Sec61 gamma subunit.
   
 0.999
Q2F5L5_BOMMO
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 0.999
RpS5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.999
RpS3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.999
RpL23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.999
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.