STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argGUnannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (404 aa)    
Predicted Functional Partners:
argH
Unannotated protein.
 
 
 0.999
FTRO_0050260
Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 
 0.997
carB
Unannotated protein.
 
 
 0.993
FTRO_0011530
Unannotated protein; Belongs to the CarB family.
 
 
 0.978
carA
Unannotated protein; Belongs to the CarA family.
  
 
 0.970
pyrAA2
Unannotated protein; Belongs to the CarA family.
  
 
 0.967
purA
Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.964
FTRO_0021060
Unannotated protein; Belongs to the aspartokinase family.
  
 
 0.960
argC
Unannotated protein; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
  
 0.960
argB
Unannotated protein.
  
  
 0.954
Your Current Organism:
Fructobacillus tropaeoli
NCBI taxonomy Id: 709323
Other names: DSM 23246, F. tropaeoli, Fructobacillus sp. F214-1, Fructobacillus tropaeoli Endo et al. 2011, JCM 16675, strain F214-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.