STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FTRO_0170020Unannotated protein. (273 aa)    
Predicted Functional Partners:
FTRO_0170030
Unannotated protein.
       0.775
FTRO_0170040
Unannotated protein.
       0.773
FTRO_0170050
Unannotated protein.
       0.773
FTRO_0120240
Unannotated protein.
  
     0.762
FTRO_0170100
Unannotated protein.
  
     0.758
FTRO_0041280
Unannotated protein.
  
     0.742
FTRO_0090320
Unannotated protein.
 
     0.735
FTRO_0032070
Unannotated protein.
 
     0.720
FTRO_0050050
Unannotated protein.
  
     0.697
FTRO_0130210
Unannotated protein.
  
     0.688
Your Current Organism:
Fructobacillus tropaeoli
NCBI taxonomy Id: 709323
Other names: DSM 23246, F. tropaeoli, Fructobacillus sp. F214-1, Fructobacillus tropaeoli Endo et al. 2011, JCM 16675, strain F214-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.