STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0027Cyclohexanone monooxygenase. (504 aa)    
Predicted Functional Partners:
CSIRO_2064
Lipase/esterase.
 
 0.772
CSIRO_3668
Hypothetical protein.
    
 
 0.647
CSIRO_3884
Alpha/beta hydrolase fold-3 domain-containing protein.
 
 0.587
CSIRO_4275
Putative cytochrome P450 hydroxylase.
 
 0.528
CSIRO_0396
Salicylate hydroxylase.
  
 0.469
CSIRO_3601
Salicylate hydroxylase.
  
 0.456
atpA
ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.454
CSIRO_1743
FAD-dependent oxidoreductase.
  
 0.449
CSIRO_4150
Gluconolactonase protein family.
  
 
  0.444
CSIRO_0076
Putative gluconolactonase.
  
 
  0.439
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.