Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CSIRO_0062Branched-chain amino acid transport ATP-binding protein. (167 aa)    
Predicted Functional Partners:
CSIRO_0064
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.954
CSIRO_0063
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.950
CSIRO_0024
Branched-chain amino acid ABC-type transport system protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.938
CSIRO_2084
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.938
CSIRO_0061
ABC transporter ATP-binding protein.
 
 
 
0.894
CSIRO_2086
ABC transporter ATP-binding protein.
  
 
  0.854
CSIRO_0022
ABC transporter ATP-binding protein.
  
 
  0.853
CSIRO_2083
ABC transporter substrate-binding protein.
  
 
  0.849
CSIRO_0019
ABC transporter substrate-binding protein.
  
 
  0.848
CSIRO_0025
ABC transporter substrate-binding protein.
  
 
  0.846
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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