Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_0076Putative gluconolactonase. (311 aa)    
Predicted Functional Partners:
CSIRO_3420
Quino(hemo)protein alcohol dehydrogenase.
  
  
 0.838
CSIRO_0074
Short-chain dehydrogenase/reductase SDR.
    
  0.810
CSIRO_0075
OsmC-like protein.
       0.768
CSIRO_0812
Acetoin(diacetyl) reductase.
     
  0.676
CSIRO_2077
Isoquinoline 1-oxidoreductase beta subunit.
     
 0.638
wbpB
Lipopolysaccaride biosynthesis protein WbpB.
 
 
 0.569
CSIRO_0077
Regulatory protein; Belongs to the LysR transcriptional regulatory family.
       0.540
CSIRO_3963
Hypothetical protein.
 
     0.525
CSIRO_1340
Dpoxide hydrolase.
 
    0.503
CSIRO_3833
Oxidoreductase-like protein.
  
 
 0.503
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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