Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0084Extracellular solute-binding protein. (349 aa)    
Predicted Functional Partners:
CSIRO_0086
ABC-type nitrate/sulfonate/bicarbonate transport system.
 
 0.945
CSIRO_0085
ABC transporter related protein.
 
 0.923
CSIRO_0604
Transport system inner membrane component.
 
 0.789
CSIRO_0036
ABC transporter permease.
 
 0.781
CSIRO_2916
Nitrate ABC transporter, permease protein.
 
 0.780
CSIRO_2521
Cyanate ABC transporter, permease protein.
 
 0.772
CSIRO_4010
ABC transporter permease protein.
    
  0.754
CSIRO_2917
Nitrate ABC transporter, ATP-binding protein.
 
 0.710
CSIRO_3816
ABC-type transport system permease; Involved in resistance to organic solvents.
     
 0.709
pstS
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
     
 0.707
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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