Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
trbCConjugative transfer protein TrbC. (75 aa)    
Predicted Functional Partners:
trbE
Conjugative transfer protein TrbE.
 
 
 0.987
trbD
Conjugative transfer protein TrbD.
 
  
 0.983
trbJ
Conjugative transfer protein TrbJ.
 
  
 0.980
trbG
Conjugative transfer protein TrbG.
 
  
 0.969
trbL
Conjugative transfer protein TrbL.
 
  
 0.968
trbI
Conjugative transfer protein TrbI.
 
  
 0.967
trbF
Conjugative transfer protein TrbF.
 
  
 0.967
trbB
Conjugative transfer protein TrbB.
 
  
 0.966
CSIRO_0099
CopG domain-containing protein.
 
     0.811
CSIRO_0101
Relaxase; Type IV secretory pathway, VirD2 components.
 
   
 0.803
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.