STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0125AAA ATPase. (315 aa)    
Predicted Functional Partners:
CSIRO_0127
Hypothetical protein.
 
 
   0.997
CSIRO_0124
Hypothetical protein.
 
     0.929
CSIRO_0126
Hypothetical protein.
       0.800
CSIRO_0131
Hypothetical protein.
       0.524
CSIRO_0128
CopG-like DNA-binding protein.
       0.520
CSIRO_0129
Hypothetical protein.
       0.520
CSIRO_1387
Hypothetical protein.
  
     0.493
CSIRO_0130
Putative transcriptional regulator.
       0.484
CSIRO_0132
Hypothetical protein.
       0.484
CSIRO_0224
Hypothetical protein.
  
     0.423
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.