STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0252Hypothetical protein. (164 aa)    
Predicted Functional Partners:
tadZ
Type II/IV secretion system ATPase TadZ.
 
  
 0.834
CSIRO_0251
Hypothetical protein.
 
     0.801
cpaB
Flp pilus assembly protein CpaB.
 
  
 0.794
tadB
Flp pilus assembly protein TadB.
 
  
 0.764
CSIRO_0253
Hypothetical protein.
       0.598
CSIRO_0254
Omega-amino acid--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.553
tadC
Type II/IV secretion system protein TadC.
 
    0.531
CSIRO_0860
Hypothetical protein.
  
     0.520
CSIRO_2224
Hypothetical protein.
  
     0.496
CSIRO_3209
Hypothetical protein.
  
     0.489
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.