STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0255Diguanylate phosphodiesterase. (480 aa)    
Predicted Functional Partners:
CSIRO_0358
Diguanylate cyclase/phosphodiesterase.
 
 0.900
CSIRO_0341
Diguanylate cyclase/phosphodiesterase.
 
 
 0.891
CSIRO_3629
Diguanylate cyclase/phosphodiesterase.
 
 
 0.880
CSIRO_2365
Sensory box histidine kinase/response regulator.
  
 0.866
CSIRO_1389
Diguanylate cyclase/phosphodiesterase.
 
 0.861
CSIRO_4108
Hypothetical protein.
  
 0.838
CSIRO_3150
Hypothetical protein.
 
 
 0.825
CSIRO_3365
Pole remodelling regulatory diguanylate cyclase.
  
 
 0.815
CSIRO_0920
Two-component hybrid sensor and regulator.
 
 0.806
CSIRO_0589
Hypothetical protein.
 
0.798
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.