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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0270Glutamate synthase (NADPH) small chain. (485 aa)    
Predicted Functional Partners:
CSIRO_0268
Glutamate synthase (NADPH) large chain.
 0.999
CSIRO_0611
Ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family.
 0.999
CSIRO_4286
Adenylate cyclase.
    
 0.991
CSIRO_3810
Ferredoxin.
    
 0.988
CSIRO_1559
Electron transfer flavoprotein beta subunit.
   
 
 0.958
CSIRO_1943
Tungsten-containing formate dehydrogenase beta subunit.
 
 
 0.891
CSIRO_0637
4Fe-4S ferredoxin, iron-sulfur binding protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 0.855
CSIRO_2234
Cytochrome P450.
     
 0.842
CSIRO_2209
NAD-specific glutamate dehydrogenase/ NADP-specific glutamate dehydrogenase; Bifunctional; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.841
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.832
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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