Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSIRO_0316N-formylglutamate amidohydrolase. (250 aa)    
Predicted Functional Partners:
CSIRO_0385
Protein of unknown function DUF1244.
     0.727
CSIRO_0314
Transglutaminase-like protein.
 
     0.690
CSIRO_0315
Hypothetical protein.
       0.662
CSIRO_0014
Amidohydrolase.
     
  0.647
CSIRO_0020
Methylthioadenosine deaminase.
     
  0.647
CSIRO_0313
Hypothetical protein.
       0.590
CSIRO_1236
Isochorismatase.
  
  
 0.471
CSIRO_2009
Cytosine deaminase.
     
  0.432
CSIRO_1791
Transglutaminase-like domain-containing protein.
 
     0.424
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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