Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CSIRO_0327N-methyltransferase. (231 aa)    
Predicted Functional Partners:
CSIRO_1090
Transcription activator.
  
   
 0.742
CSIRO_2887
Hypothetical protein.
  
     0.719
CSIRO_1596
Hypothetical protein.
 
     0.669
gcvP
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.662
CSIRO_0326
Non-specific DNA-binding protein Dps / iron-binding ferritin-like antioxidant protein / Ferroxidase; Belongs to the Dps family.
       0.653
CSIRO_0219
Hypothetical protein.
  
  
  0.647
CSIRO_1451
Hypothetical protein.
     
 0.646
CSIRO_3419
Hypothetical protein.
  
     0.634
CSIRO_4095
Hypothetical protein.
  
     0.625
CSIRO_2812
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.617
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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