STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0350succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B. (216 aa)    
Predicted Functional Partners:
CSIRO_0351
succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A.
 0.999
CSIRO_0773
3-oxoadipate CoA-transferase subunit A.
 0.999
CSIRO_0772
3-oxoadipate CoA-transferase subunit B.
 
0.992
CSIRO_1307
enoyl-CoA hydratase/ 3-hydroxyacyl-CoA dehydrogenase/ 3-hydroxybutyryl-CoA epimerase; Bifunctional; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.796
CSIRO_1439
Bifunctional; enoyl-CoA hydratase/ delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/ 3-hydroxyacyl-CoA dehydrogenase/ 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.796
CSIRO_1691
enoyl-CoA hydratase/ 3-hydroxyacyl-CoA dehydrogenase/ 3-hydroxybutyryl-CoA epimerase; Bifunctional.
  
 0.796
CSIRO_2662
NAD-dependent malic enzyme.
  
 
 0.783
paaN
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase.
  
 0.774
CSIRO_3035
hydroxymethylglutaryl-CoA lyase.
  
 
 0.737
CSIRO_0682
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.679
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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