Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CSIRO_0392Fatty acid desaturase; Bifunctional. (344 aa)    
Predicted Functional Partners:
CSIRO_2258
Fatty acid desaturase.
   
 0.664
CSIRO_3418
S-(hydroxymethyl) glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
  
  0.595
CSIRO_1588
Phospholipid/glycerol acyltransferase.
   
 0.553
CSIRO_0185
1-acyl-sn-glycerol-3-phosphate acyltransferase.
   
 0.538
CSIRO_2876
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
   0.494
CSIRO_3008
Cysteine synthase B.
    
   0.494
CSIRO_0524
Ribonucleotide reductase of class 1a (aerobic), beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
  
  
  0.475
hrpB
ATP-dependent helicase HrpB.
    
 
 0.466
CSIRO_1004
Cytochrome P450 family protein.
  
 
 0.464
CSIRO_1194
Hypothetical protein; Belongs to the cytochrome P450 family.
  
 
 0.450
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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