STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_04022-haloacid dehalogenase. (247 aa)    
Predicted Functional Partners:
CSIRO_3295
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.834
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.743
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.688
CSIRO_3132
Haloacid dehalogenase type II.
  
  
 
0.685
CSIRO_1114
Hypothetical protein.
   
 
  0.650
CSIRO_2408
Serine protease precursor; Belongs to the peptidase S1C family.
   
 
  0.650
CSIRO_3463
Serine protease precursor MucD/AlgY; Associated with sigma factor RpoE; Belongs to the peptidase S1C family.
   
 
  0.650
CSIRO_4020
HtrA protease/chaperone protein; Belongs to the peptidase S1C family.
   
 
  0.650
CSIRO_3947
Fe-S protein.
    
  0.642
CSIRO_0401
Hypothetical protein.
       0.625
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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