Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CSIRO_0406Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (304 aa)    
Predicted Functional Partners:
CSIRO_1912
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.745
CSIRO_2563
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.699
CSIRO_0424
Hydrogen peroxide response regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.594
CSIRO_0407
3-oxoacyl-(acyl-carrier protein) reductase.
       0.536
CSIRO_0404
Gamma-glutamyltranspeptidase.
       0.495
CSIRO_2100
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.482
CSIRO_0408
Cupin domain-containing protein; Belongs to the pirin family.
       0.473
CSIRO_2184
Glycine cleavage system transcriptional activator.
  
     0.461
rpoZ
DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
 
 0.459
CSIRO_0268
Glutamate synthase (NADPH) large chain.
     
 0.442
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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