STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0450Polymyxin resistance protein ArnC; Glycosyl transferase. (351 aa)    
Predicted Functional Partners:
CSIRO_0451
Hypothetical protein.
 
  
 0.885
CSIRO_3017
Glycosyl transferase.
 
 
 0.814
CSIRO_3634
Dolichol-phosphate mannosyltransferase-like protein.
 
 
 0.662
CSIRO_3233
Putative glycosyl transferase.
  
  
 0.638
hisG
ATP phosphoribosyltransferase catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.
  
    0.607
CSIRO_0448
ATP phosphoribosyltransferase regulatory subunit.
       0.597
CSIRO_3262
Hypothetical protein.
  
 
  0.538
CSIRO_0452
Hypothetical protein.
       0.530
CSIRO_1725
UDP-glucose 4-epimerase.
 
 
 0.518
CSIRO_1105
Nucleotidyltransferase.
 
 0.505
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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