Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0451Hypothetical protein. (282 aa)    
Predicted Functional Partners:
CSIRO_0450
Polymyxin resistance protein ArnC; Glycosyl transferase.
 
  
 0.909
CSIRO_0452
Hypothetical protein.
 
     0.713
CSIRO_0448
ATP phosphoribosyltransferase regulatory subunit.
 
     0.603
hisG
ATP phosphoribosyltransferase catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.
       0.547
CSIRO_1658
Hypothetical protein.
 
    0.541
CSIRO_3165
Hypothetical protein.
  
     0.530
CSIRO_3278
Putative PMT family glycosyltransferase.
 
    0.520
CSIRO_1757
Hypothetical protein.
 
    0.519
CSIRO_1336
Hypothetical protein.
  
     0.495
CSIRO_0810
Hypothetical protein.
  
     0.475
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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