STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0453Hypothetical protein. (288 aa)    
Predicted Functional Partners:
CSIRO_3383
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
    
 0.596
CSIRO_1316
Signal recognition particle GTPase.
  
     0.508
CSIRO_0655
Putative exported protein.
 
  
 0.493
CSIRO_0454
Hypothetical protein.
       0.471
ftsI
Cell division protein FtsI.
  
  
 0.454
CSIRO_2357
Transpeptidase / transglycosylase; Bifunctional.
  
  
 0.453
CSIRO_0591
Murein endopeptidase.
  
     0.449
CSIRO_2950
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
    
 0.445
CSIRO_0382
Protein of unknown function DUF882.
 
     0.438
CSIRO_1527
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
  
 0.422
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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