Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0466Hypothetical protein. (582 aa)    
Predicted Functional Partners:
CSIRO_2465
HlyB/MsbA-like ABC transporter.
    
 0.702
CSIRO_3641
ABC transporter ATP-binding protein.
  
  
 0.658
CSIRO_1216
Hypothetical protein.
  
  
 0.647
CSIRO_4047
ABC-type multidrug transport system, ATPase component.
     
 0.599
CSIRO_1394
ABC-type multidrug transport system.
    
 0.564
ndvA
Beta-(1-->2)glucan export ATP-binding/permease protein NdvA; Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
    
 0.564
CSIRO_3509
Phospholipid-lipopolysaccharide ABC transporter.
    
 0.564
CSIRO_3862
ABC transporter related protein.
    
 0.564
msbA
Lipid A export ATP-binding/permease protein MsbA.
    
 0.564
CSIRO_4085
ABC transporter HlyB/MsbA family.
    
 0.564
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.