Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSIRO_0470Glycolate dehydrogenase. (455 aa)    
Predicted Functional Partners:
CSIRO_0471
Glycolate dehydrogenase.
 
 
 0.976
CSIRO_0472
Glycolate dehydrogenase.
 
 0.950
CSIRO_4200
Glycolate dehydrogenaseFAD-binding subunit.
 
 
 0.919
glcD
Glycolate dehydrogenase.
 
 
 0.918
CSIRO_0268
Glutamate synthase (NADPH) large chain.
    
 0.884
CSIRO_3977
Aerobic glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.807
CSIRO_1927
Iron-sulfur cluster-binding protein.
    
 0.801
CSIRO_1698
Isocitrate lyase.
     
 0.776
CSIRO_2662
NAD-dependent malic enzyme.
    
 0.748
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.744
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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